Adapters
FASTA To Sequence
Parses plain-text UTF-8 FASTA research data artifact rows into research data artifact rows.
Runnablesequence data
Catalog entry
About this entry
Parses plain-text UTF-8 FASTA research data artifact rows into research data artifact rows. The certified local adapter supports multi-record and multi-line FASTA, preserves header text as the sequence id, normalizes sequence text to uppercase, infers dna/rna/protein from filename or format hints and certified IUPAC alphabets, and fails closed on malformed input.
Use in DarwinOmics
How to use it
Use this entry from the DarwinOmics catalog when it matches the data and analysis path.