Adapters

BAM To CRAM

BAM To CRAM handles read alignment or aligned-read processing with captured inputs, parameters, and output artifacts for reproducibility review.

Runnablealigned sequencing reads

Catalog entry

About this entry

BAM To CRAM handles read alignment or aligned-read processing with captured inputs, parameters, and output artifacts for reproducibility review. In DarwinOmics it is cataloged with aligned sequencing reads as input and reviewable analysis output as output, so reviewers can trace how the regenerated artifact was produced and compare it with the submitted analysis.

CategoryAdapters
StatusRunnable
Inputaligned sequencing reads
OutputResults ready for review

Use in DarwinOmics

How to use it

Use this entry from the DarwinOmics catalog when it matches the data and analysis path.