Pipelines & Workflow Elements
Darwin Archr Tool
Single-cell ATAC-seq analysis with ArchR: fragment-level processing, peak calling, dimensionality reduction, gene scoring, and trajectory inference
RunnableWorkflow
Catalog entry
About this entry
Single-cell ATAC-seq analysis with ArchR: fragment-level processing, peak calling, dimensionality reduction, gene scoring, and trajectory inference Steps: Step 1: Load Fragment Files; Step 2: Peak Calling and Chromatin Analysis; Step 3: Export Results. Verticals: epigenomics, single_cell, oncogenomics.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.