Darwin Bacass

Complete bacterial genome assembly from short reads with QC, assembly via Unicycler, annotation with Prokka, and quality reporting. Steps: Step 1: fastqc; Step 2: fastp; Step 3: unicycler; Step 4: quast; Step 5: prokka; Step 6: multiqc. Verticals: microbial_genomics, metagenomics.

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.