Darwin Cageseq

CAGE-seq analysis for genome-wide transcription start site mapping and promoter activity quantification. Steps: Step 1: fastqc; Step 2: cutadapt; Step 3: star_align; Step 4: samtools_sort; Step 5: ctss_clustering; Step 6: multiqc. Verticals: transcriptomics, epigenomics.

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.