Pipelines & Workflow Elements

Darwin Chromap Tool

Ultra-fast alignment and preprocessing of chromatin accessibility data with Chromap: ATAC-seq, CUT&RUN, and Hi-C alignment with barcode processing

RunnableWorkflow

Catalog entry

About this entry

Ultra-fast alignment and preprocessing of chromatin accessibility data with Chromap: ATAC-seq, CUT&RUN, and Hi-C alignment with barcode processing Steps: Step 1: Load FASTQ Reads; Step 2: Fragment Filtering and Peak Calling; Step 3: Export Alignment Results. Verticals: epigenomics, single_cell.

CategoryPipelines & Workflow Elements
StatusRunnable
InputFlexible research data
OutputResults ready for review

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.