Pipelines & Workflow Elements
Darwin Chromap Tool
Ultra-fast alignment and preprocessing of chromatin accessibility data with Chromap: ATAC-seq, CUT&RUN, and Hi-C alignment with barcode processing
RunnableWorkflow
Catalog entry
About this entry
Ultra-fast alignment and preprocessing of chromatin accessibility data with Chromap: ATAC-seq, CUT&RUN, and Hi-C alignment with barcode processing Steps: Step 1: Load FASTQ Reads; Step 2: Fragment Filtering and Peak Calling; Step 3: Export Alignment Results. Verticals: epigenomics, single_cell.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.