Pipelines & Workflow Elements
Darwin Circrna
Genome-wide detection, quantification, and functional annotation of circular RNAs from RNA-seq data.
RunnableWorkflow
Catalog entry
About this entry
Genome-wide detection, quantification, and functional annotation of circular RNAs from RNA-seq data. Steps: Step 1: fastqc; Step 2: trim_galore; Step 3: star_align; Step 4: circexplorer2; Step 5: ciriquant; Step 6: multiqc. Verticals: transcriptomics, epigenomics.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.