Pipelines & Workflow Elements

Darwin Circrna

Genome-wide detection, quantification, and functional annotation of circular RNAs from RNA-seq data.

RunnableWorkflow

Catalog entry

About this entry

Genome-wide detection, quantification, and functional annotation of circular RNAs from RNA-seq data. Steps: Step 1: fastqc; Step 2: trim_galore; Step 3: star_align; Step 4: circexplorer2; Step 5: ciriquant; Step 6: multiqc. Verticals: transcriptomics, epigenomics.

CategoryPipelines & Workflow Elements
StatusRunnable
InputFlexible research data
OutputResults ready for review

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.