Pipelines & Workflow Elements
Darwin Createtaxdb
Build custom taxonomic databases for Kraken2, DIAMOND, or MALT from NCBI or custom genome collections.
RunnableWorkflow
Catalog entry
About this entry
Build custom taxonomic databases for Kraken2, DIAMOND, or MALT from NCBI or custom genome collections. Steps: Step 1: genome_download; Step 2: build_kraken2_db; Step 3: build_diamond_db; Step 4: db_validate. Verticals: metagenomics, microbial_genomics.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.