Darwin Datasync

Automated download and synchronisation of genomic datasets from SRA, ENA, or NCBI with integrity verification. Steps: Step 1: accession_fetch; Step 2: sra_to_fastq; Step 3: md5_check; Step 4: fastqc; Step 5: multiqc. Verticals: genomics, metagenomics.

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.