Pipelines & Workflow Elements
Darwin Fastquorum
Consensus sequence generation from duplex and molecular-barcoded sequencing reads for error-corrected variant calling
RunnableWorkflow
Catalog entry
About this entry
Consensus sequence generation from duplex and molecular-barcoded sequencing reads for error-corrected variant calling Steps: Step 1: FastQC; Step 2: BWA Alignment; Step 3: UMI Grouping (fgbio); Step 4: Consensus Calling (fgbio); Step 5: Re-align Consensus Reads; Step 6: MultiQC Report. Verticals: oncogenomics, clinical_genomics.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.