Pipelines & Workflow Elements
Darwin Genomeassembler
De novo genome assembly pipeline supporting HiFi, ONT, and hybrid sequencing with QC and scaffolding
Runnablesequencing reads
Catalog entry
About this entry
De novo genome assembly pipeline supporting HiFi, ONT, and hybrid sequencing with QC and scaffolding Steps: Step 1: FastQC; Step 2: Read QC and Filtering; Step 3: De Novo Assembly; Step 4: Purge Duplicates; Step 5: BUSCO Completeness; Step 6: Merqury Assembly QV; Step 7: Assembly Report. Verticals: genomics, rare_disease.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.