Darwin Genomeqc

Comprehensive genome sequencing quality control with coverage, insert size, and duplication metrics Steps: Step 1: BAM Flagstat; Step 2: Qualimap BamQC; Step 3: Picard CollectMultipleMetrics; Step 4: SAMtools Stats; Step 5: MultiQC Report. Verticals: genomics, clinical_genomics.

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.