Pipelines & Workflow Elements

Darwin Hadge

Unified demultiplexing pipeline combining hashtag oligo and genotype-based methods for pooled single-cell experiments

RunnableWorkflow

Catalog entry

About this entry

Unified demultiplexing pipeline combining hashtag oligo and genotype-based methods for pooled single-cell experiments Steps: Step 1: Cell Ranger Count; Step 2: Hashtag Demultiplexing; Step 3: Genotype Demultiplexing (vireo); Step 4: Consensus Assignment; Step 5: HADGE Report. Verticals: single_cell, immunogenomics.

CategoryPipelines & Workflow Elements
StatusRunnable
InputFlexible research data
OutputResults ready for review

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.