Darwin Kmermaid

k-mer sketching and comparison of genomic sequences using sourmash for fast similarity search and containment analysis. Steps: Step 1: fastp; Step 2: sourmash_sketch; Step 3: sourmash_compare; Step 4: multiqc. Verticals: genomics, comparative_genomics, metagenomics.

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.