Darwin Magmap

Read mapping, abundance quantification, and taxonomic annotation of metagenome-assembled genomes Steps: Step 1: MAG Quality Assessment (CheckM2); Step 2: Read Mapping (Bowtie2); Step 3: Coverage Quantification (CoverM); Step 4: GTDB-Tk Taxonomy; Step 5: MAGmap Report. Verticals: metagenomics, microbial_genomics.

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.