Pipelines & Workflow Elements

Darwin Omicsgenetraitassociation

Multi-omics integration pipeline for gene-trait association testing including eQTL, pQTL, and mQTL analyses

RunnableWorkflow

Catalog entry

About this entry

Multi-omics integration pipeline for gene-trait association testing including eQTL, pQTL, and mQTL analyses Steps: Step 1: Genotype QC (PLINK2); Step 2: Expression Normalisation; Step 3: Genotype PCA and Covariate Prep; Step 4: QTL Mapping (tensorQTL); Step 5: Colocalisation (coloc); Step 6: OGTA Report. Verticals: population_genomics, clinical_genomics.

CategoryPipelines & Workflow Elements
StatusRunnable
InputFlexible research data
OutputResults ready for review

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.