Pipelines & Workflow Elements
Darwin Omicsgenetraitassociation
Multi-omics integration pipeline for gene-trait association testing including eQTL, pQTL, and mQTL analyses
RunnableWorkflow
Catalog entry
About this entry
Multi-omics integration pipeline for gene-trait association testing including eQTL, pQTL, and mQTL analyses Steps: Step 1: Genotype QC (PLINK2); Step 2: Expression Normalisation; Step 3: Genotype PCA and Covariate Prep; Step 4: QTL Mapping (tensorQTL); Step 5: Colocalisation (coloc); Step 6: OGTA Report. Verticals: population_genomics, clinical_genomics.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.