Pipelines & Workflow Elements

Darwin Pairgenomealign

Pairwise whole-genome alignment using LAST or minimap2 for comparative genomics and synteny analysis.

Runnablesequencing reads

Catalog entry

About this entry

Pairwise whole-genome alignment using LAST or minimap2 for comparative genomics and synteny analysis. Steps: Step 1: genome_prepare; Step 2: last_db; Step 3: last_align; Step 4: dotplot; Step 5: multiqc. Verticals: comparative_genomics, genomics.

CategoryPipelines & Workflow Elements
StatusRunnable
Inputsequencing reads
Outputaligned sequencing reads

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.