Pipelines & Workflow Elements
Darwin Panoramaseq
Integration and analysis of multi-modal single-cell data including RNA, ATAC, and protein measurements
RunnableWorkflow
Catalog entry
About this entry
Integration and analysis of multi-modal single-cell data including RNA, ATAC, and protein measurements Steps: Step 1: Cell Ranger ARC (RNA+ATAC); Step 2: RNA QC (Scanpy); Step 3: ATAC QC (ArchR); Step 4: Multi-modal Integration (WNN); Step 5: Joint Clustering and Annotation; Step 6: PanoramaSeq Report. Verticals: single_cell, epigenomics, immunogenomics.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.