Pipelines & Workflow Elements

Darwin Panoramaseq

Integration and analysis of multi-modal single-cell data including RNA, ATAC, and protein measurements

RunnableWorkflow

Catalog entry

About this entry

Integration and analysis of multi-modal single-cell data including RNA, ATAC, and protein measurements Steps: Step 1: Cell Ranger ARC (RNA+ATAC); Step 2: RNA QC (Scanpy); Step 3: ATAC QC (ArchR); Step 4: Multi-modal Integration (WNN); Step 5: Joint Clustering and Annotation; Step 6: PanoramaSeq Report. Verticals: single_cell, epigenomics, immunogenomics.

CategoryPipelines & Workflow Elements
StatusRunnable
InputFlexible research data
OutputResults ready for review

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.