Pipelines & Workflow Elements

Darwin Scdownstream

Downstream single-cell RNA-seq analysis including clustering, annotation, trajectory inference, and cell-cell communication.

RunnableWorkflow

Catalog entry

About this entry

Downstream single-cell RNA-seq analysis including clustering, annotation, trajectory inference, and cell-cell communication. Steps: Step 1: input_qc; Step 2: normalize_cluster; Step 3: celltypist; Step 4: trajectory; Step 5: cellchat; Step 6: report. Verticals: single_cell, transcriptomics.

CategoryPipelines & Workflow Elements
StatusRunnable
InputFlexible research data
OutputResults ready for review

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.