Pipelines & Workflow Elements
Darwin scGPT
Generative pre-trained transformer for single-cell transcriptomics with cell type annotation and perturbation prediction.
RunnableWorkflowbowang-lab/scGPT | 1,589 stars
Catalog entry
About this entry
Generative pre-trained transformer for single-cell transcriptomics with cell type annotation and perturbation prediction. Steps: Step 1: Count Normalization & Feature Selection; Step 2: Single-Cell Embedding Inference; Step 3: Clustering, Annotation & Export. Verticals: single_cell, transcriptomics.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.