Pipelines & Workflow Elements
Darwin Snapatac2 Tool
Scalable single-cell ATAC-seq analysis with SnapATAC2: spectral embedding, peak calling, TF motif scanning, and multi-sample integration
Runnablealigned sequencing reads
Catalog entry
About this entry
Scalable single-cell ATAC-seq analysis with SnapATAC2: spectral embedding, peak calling, TF motif scanning, and multi-sample integration Steps: Step 1: Load Fragment Files; Step 2: Spectral Embedding and Peak Analysis; Step 3: Export Results. Verticals: epigenomics, single_cell.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.