Tools
GATK4
GATK4 supports variant calling, normalization, or annotation so genomic findings can be reproduced from the supplied evidence.
RunnableAnalysis toolbroadinstitute/gatk | 1,970 stars
Catalog entry
About this entry
GATK4 supports variant calling, normalization, or annotation so genomic findings can be reproduced from the supplied evidence. In DarwinOmics it is cataloged with flexible research input as input and reviewable analysis output as output, so reviewers can trace how the regenerated artifact was produced and compare it with the submitted analysis.
Use in DarwinOmics
How to use it
Use this tool to reproduce a concrete analysis step from supplied inputs, captured parameters, and versioned outputs, then compare the regenerated artifacts against the submitted result record.