Adapters

GFF To BED

Native deterministic GFF3-to-BED adapter. Each research data artifact value contains one complete UTF-8 GFF3 v3 document; the output value is exact BED text matching pinned gffread v0.12.9 for the certified transcript/exon/CDS subset.

RunnableData adapter

Catalog entry

About this entry

Native deterministic GFF3-to-BED adapter. Each research data artifact value contains one complete UTF-8 GFF3 v3 document; the output value is exact BED text matching pinned gffread v0.12.9 for the certified transcript/exon/CDS subset.

CategoryAdapters
StatusRunnable
InputFlexible research data
OutputResults ready for review

Use in DarwinOmics

How to use it

Use this entry from the DarwinOmics catalog when it matches the data and analysis path.