Gromacs

Gromacs handles read alignment or aligned-read processing with captured inputs, parameters, and output artifacts for reproducibility review. In DarwinOmics it is cataloged with aligned sequencing reads as input and reviewable analysis output as output, so reviewers can trace how the regenerated artifact was produced and compare it with the submitted analysis.

Use in DarwinOmics

How to use it

Use this tool to reproduce a concrete analysis step from supplied inputs, captured parameters, and versioned outputs, then compare the regenerated artifacts against the submitted result record.