Adapters

Parabricks Fq2bam

Parabricks Fq2bam handles read alignment or aligned-read processing with captured inputs, parameters, and output artifacts for reproducibility review.

RunnableData adapter

Catalog entry

About this entry

Parabricks Fq2bam handles read alignment or aligned-read processing with captured inputs, parameters, and output artifacts for reproducibility review. In DarwinOmics it is cataloged with flexible research input as input and reviewable analysis output as output, so reviewers can trace how the regenerated artifact was produced and compare it with the submitted analysis.

CategoryAdapters
StatusRunnable
InputFlexible research data
OutputResults ready for review

Use in DarwinOmics

How to use it

Use this entry from the DarwinOmics catalog when it matches the data and analysis path.