Adapters
Darwinomics Dcrf Adapters
The bridges between the outside world and research data artifact. Every file that enters the system goes through an adapter: FASTQ, BAM, VCF, TSV, H5AD, GFF3, Parquet, and 35 more formats.
RunnableData adapter
Catalog entry
About this entry
The bridges between the outside world and research data artifact. Every file that enters the system goes through an adapter: FASTQ, BAM, VCF, TSV, H5AD, GFF3, Parquet, and 35 more formats. Adapters detect format, validate contents, produce ValidationReports on errors, repair auto-fixable issues, and ingest valid data into research data artifact. Without adapters, no data enters or leaves the system.
Use in DarwinOmics
How to use it
Use this entry from the DarwinOmics catalog when it matches the data and analysis path.