Pipelines & Workflow Elements

RNA-seq Alevin

Single-cell RNA-seq quantification using alevin/Salmon.

Runnablesequencing readsCOMBINE-lab/salmon | 901 stars

Catalog entry

About this entry

Single-cell RNA-seq quantification using alevin/Salmon.

CategoryPipelines & Workflow Elements
StatusRunnable
Inputsequencing reads
Outputexpression matrices

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.