Pipelines & Workflow Elements
RNA-seq Salmon
RNA-seq quantification using Salmon instead of STAR+featureCounts. Faster when you only need gene-level counts and don't need BAM files.
Runnablealigned sequencing readsCOMBINE-lab/salmon | 901 stars
Catalog entry
About this entry
RNA-seq quantification using Salmon instead of STAR+featureCounts. Faster when you only need gene-level counts and don't need BAM files.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.