Pipelines & Workflow Elements

RNA-seq Salmon Quant

RNA-seq using Salmon quasi-mapping for fast quantification without full alignment.

Runnablealigned sequencing readsCOMBINE-lab/salmon | 901 stars

Catalog entry

About this entry

RNA-seq using Salmon quasi-mapping for fast quantification without full alignment.

CategoryPipelines & Workflow Elements
StatusRunnable
Inputaligned sequencing reads
Outputexpression matrices

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.