Pipelines & Workflow Elements

RNA-seq Star Salmon

RNA-seq using STAR alignment followed by Salmon quantification and DESeq2 differential expression.

Runnablesequencing readsalexdobin/STAR | 2,216 stars

Catalog entry

About this entry

RNA-seq using STAR alignment followed by Salmon quantification and DESeq2 differential expression.

CategoryPipelines & Workflow Elements
StatusRunnable
Inputsequencing reads
Outputaligned sequencing reads

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.