Pipelines & Workflow Elements

Singlecell RNA-seq Scanpy

Single-cell preprocessing, normalization, UMAP, and Leiden clustering.

Runnablesequencing readsscverse/scanpy | 2,497 stars

Catalog entry

About this entry

Single-cell preprocessing, normalization, UMAP, and Leiden clustering.

CategoryPipelines & Workflow Elements
StatusRunnable
Inputsequencing reads
OutputResults ready for review

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.