Pipelines & Workflow Elements

Singlecell scGPT

scRNA-seq with automatic cell type annotation using scGPT foundation model.

Runnablesequencing readsbowang-lab/scGPT | 1,589 stars

Catalog entry

About this entry

scRNA-seq with automatic cell type annotation using scGPT foundation model.

CategoryPipelines & Workflow Elements
StatusRunnable
Inputsequencing reads
OutputResults ready for review

Use in DarwinOmics

How to use it

Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.