Pipelines & Workflow Elements
Somatic Variant Calling
Tumor-normal paired somatic variant calling using GATK Mutect2. For cancer genomics.
Runnablealigned sequencing reads
Catalog entry
About this entry
Tumor-normal paired somatic variant calling using GATK Mutect2. For cancer genomics.
Use in DarwinOmics
How to use it
Use this workflow element when the submitted analysis needs a multi-step execution path, imported workflow, Darwinomics wrapper, or workflow-scale comparison rather than a single module.