Tools
Bwa Mem
BWA-MEM aligns DNA sequencing reads to a reference genome. Standard aligner for WGS, WES, ChIP-seq, and ATAC-seq. Does NOT handle spliced alignments - use STAR or HISAT2 for RNA-seq. Only ~4GB RAM for human genome.
Runnablesequencing readslh3/bwa | 1,753 stars
Catalog entry
About this entry
BWA-MEM aligns DNA sequencing reads to a reference genome. Standard aligner for WGS, WES, ChIP-seq, and ATAC-seq. Does NOT handle spliced alignments - use STAR or HISAT2 for RNA-seq. Only ~4GB RAM for human genome.
Use in DarwinOmics
How to use it
Use this tool to reproduce a concrete analysis step from supplied inputs, captured parameters, and versioned outputs, then compare the regenerated artifacts against the submitted result record.