Tools
Cellranger Count
CellRanger counts gene expression from 10x Genomics single-cell data. Handles cell barcode detection, UMI counting, and gene-cell matrix generation. Requires 10x-specific FASTQ naming.
Runnablesequencing reads
Catalog entry
About this entry
CellRanger counts gene expression from 10x Genomics single-cell data. Handles cell barcode detection, UMI counting, and gene-cell matrix generation. Requires 10x-specific FASTQ naming.
Use in DarwinOmics
How to use it
Use this tool to reproduce a concrete analysis step from supplied inputs, captured parameters, and versioned outputs, then compare the regenerated artifacts against the submitted result record.