Tools
FastQC
Analyzes sequencing read quality and produces a comprehensive quality report. Checks per-base sequence quality, per-sequence quality scores, sequence duplication levels, adapter contamination, GC content distribution, and overrepresented...
Runnablesequencing readss-andrews/FastQC | 602 stars
Catalog entry
About this entry
Analyzes sequencing read quality and produces a comprehensive quality report. Checks per-base sequence quality, per-sequence quality scores, sequence duplication levels, adapter contamination, GC content distribution, and overrepresented sequences. Run before and after trimming to assess data quality.
Use in DarwinOmics
How to use it
Use this tool to reproduce a concrete analysis step from supplied inputs, captured parameters, and versioned outputs, then compare the regenerated artifacts against the submitted result record.