Tools
Leiden
Leiden clustering identifies cell populations in single-cell data using community detection on a KNN graph. Produces more well-defined clusters than Louvain. Use after UMAP to identify cell types.
RunnableAnalysis tool
Catalog entry
About this entry
Leiden clustering identifies cell populations in single-cell data using community detection on a KNN graph. Produces more well-defined clusters than Louvain. Use after UMAP to identify cell types.
Use in DarwinOmics
How to use it
Use this tool to reproduce a concrete analysis step from supplied inputs, captured parameters, and versioned outputs, then compare the regenerated artifacts against the submitted result record.