Tools
Salmon Quant
Salmon quantifies transcript-level expression using quasi-mapping. Faster than alignment-based methods. Can also quantify from aligned BAM files.
Runnablealigned sequencing readsCOMBINE-lab/salmon | 901 stars
Catalog entry
About this entry
Salmon quantifies transcript-level expression using quasi-mapping. Faster than alignment-based methods. Can also quantify from aligned BAM files.
Use in DarwinOmics
How to use it
Use this tool to reproduce a concrete analysis step from supplied inputs, captured parameters, and versioned outputs, then compare the regenerated artifacts against the submitted result record.