Snakemake Runner

Snakemake Runner runs a traceable analysis step with captured inputs, parameters, outputs, and provenance for paper-replication review. In DarwinOmics it is cataloged with sample metadata as input and reviewable analysis output as output, so reviewers can trace how the regenerated artifact was produced and compare it with the submitted analysis.

Use in DarwinOmics

How to use it

Use this tool to reproduce a concrete analysis step from supplied inputs, captured parameters, and versioned outputs, then compare the regenerated artifacts against the submitted result record.