Tools
Trim Galore
Removes adapter sequences and low-quality bases from sequencing reads. Automatically detects Illumina Universal, Nextera, and Small RNA adapters. Removes low-quality bases from read ends and discards reads shorter than minimum length.
Runnablesequencing readsFelixKrueger/TrimGalore | 561 stars
Catalog entry
About this entry
Removes adapter sequences and low-quality bases from sequencing reads. Automatically detects Illumina Universal, Nextera, and Small RNA adapters. Removes low-quality bases from read ends and discards reads shorter than minimum length. Run after FastQC identifies adapter contamination.
Use in DarwinOmics
How to use it
Use this tool to reproduce a concrete analysis step from supplied inputs, captured parameters, and versioned outputs, then compare the regenerated artifacts against the submitted result record.