Tools

VCF Filter

Filters VCF variants by quality, depth, allele frequency, and other criteria. Removes low-quality variant calls. Use after variant calling to clean up results.

Runnablesequencing reads

Catalog entry

About this entry

Filters VCF variants by quality, depth, allele frequency, and other criteria. Removes low-quality variant calls. Use after variant calling to clean up results.

CategoryTools
StatusRunnable
Inputsequencing reads
Outputsequencing reads

Use in DarwinOmics

How to use it

Use this tool to reproduce a concrete analysis step from supplied inputs, captured parameters, and versioned outputs, then compare the regenerated artifacts against the submitted result record.